Colletotrichum graminicola CBS 113173 Taxonomy ID: 1394525 (for references in articles please use NCBI:txid1394525) current name Disclaimer: The NCBI taxonomy database is not an authoritative Initially, the species were identified by the characteristic host specificity, location of isolation, and conidial morphology. Colletotrichum species have caused human infections in recent years. Taxonomy ID 645133 Data source Broad Institute C. graminicola strain M5.001 was sequenced to about 1X coverage by a research team at DuPont Nemours Inc. Colletotrichum (sexual stage: Glomerella) is a genus of fungi that are symbionts to plants as endophytes (living within the plant) or phytopathogens. Here, population-level specificity is found in some cases, though the basal lineage is plurivorous, suggesting that host specialisation is in the process of … It is by Dr Parthasarathy Seethapathy at Tamil Nadu Agricultural University. Colletotrichum graminicola (400X), causal agent of anthracnose diseases. This variability has been assessed using virulence, and more recently, 10 Subphylum Pezizomycotina ( 1PEZIQ ) Class Sordariomycetes ( 1SORDC ) Subclass Sordariomycetidae ( 1SRDAL ) Order Phyllachorales ( 1PHYRO ) Family Glomerellaceae ( 1GLOMF ) Genus Colletotrichum ( 1COLLG ) Species Colletotrichum graminicola ( COLLGR ) Taxonomy - Colletotrichum graminicola (Maize anthracnose fungus) (Glomerella graminicola) (SPECIES) When browsing through different UniProt proteins, you can use the 'basket' to save them, so that you can back to find or analyse them later. The following eleven species are recognized: C. acutatum, C. coccodes, C. crassipes, C. dematium, C. destructivum, C. gloeosporioides, C. graminicola, C. lindemuthianum, C. musae, C. orbiculare and C. trifolii. Reference: How to cite this resource - Schoch CL, et al. Colletotrichum graminicola (teleomorph Glomerella graminicola) is the major cause of stalk rot of cereals or anthracnose in maize. Colletotrichum merremiae can be identified based on its unique GAPDH, HIS3 and TUB2 sequences. Scientific classification Kingdom: Fungi Division: Ascomycota Class: Sordariomycetes Order: Glomerellales Family: Glomerellaceae Genus: Colletotrichum Species: C. lindemuthianum Binomial name Colletotrichum lindemuthianum Briosi & Cavara, Synonyms Gloeosporium lindemuthianum Sacc. One of the most important requirements for growing corn is a high quality soil which is deep, fertile and well-draining with a pH between 6.0 and 6.8. Some varieties of engineered maize seem more susceptible to infection resulting in increasing economic concerns. Colletotrichum: Taxonomy navigation › Glomerellaceae All lower taxonomy nodes (1,806) Common name i-Synonym i-Other names i ›Colletotrichum Corda, 1831: Rank i: … Colletotrichum lindemuthianum Colletotrichum lindemuthianum damage to bean pods. 2009c). Terminal (leaf) node. Colletotrichum graminicola M1.001 Taxonomy ID: 645133 (for references in articles please use NCBI:txid645133) current name Members of the genus Colletotrichum cause diseases on a number of host plants. Colletotrichum graminicola s. l. TUB2 was the most informative marker, followed by nrITS and ACT . 2009).While many species of Colletotrichum are morphologically cryptic, and may be difficult or impossible to identify through morphologic features alone, C. caudatum s.l. Colletotrichum graminicola Image 5582346 is of anthracnose (Colletotrichum graminicola ) sign on sorghum. The sequence data were generously donated to the public by DuPont in 2008. Disclaimer: The NCBI taxonomy database is not an authoritative South African isolates of Colletotrichum Corda were examined in culture and on host material. C. graminicola strain M1.001 (also known as M2) is the first member of the Colletotrichum genus to be fully sequenced. GSI and BCA analyses could not be performed for this complex because only one isolate per species could be included in the analyses. source for nomenclature or classification - please consult the Taxonomy -. A key for their identification is supplied. Corn anthracnose leaf blight and stalk rot. source for nomenclature or classification - please consult the Database (Oxford). These diseases, often referred to as anthracnose, include black spot of strawberry and key lime anthracnose (C. acutatum), anthracnose of tomato fruit (C. coccodes), sorghum red stalk rot (C. graminicola), coffee berry disease (C. kawahae), anthracnose of beans (C. lindemu- NCBI Taxonomy: a comprehensive update on curation, resources and tools. Phylum Ascomycota ( 1ASCOP ) Subphylum Pezizomycotina ( 1PEZIQ ) Class Sordariomycetes ( 1SORDC ) Subclass Sordariomycetidae ( 1SRDAL ) Order Phyllachorales ( 1PHYRO ) Family Glomerellaceae ( 1GLOMF ) Genus Colletotrichum ( 1COLLG ) Species Colletotrichum cereale ( COLLCE ) relevant scientific literature for the most reliable information. I… 2020: baaa062. It causes bitter rot in variety of crops worldwide, particularly perennials in the tropical regions (3). Colletotrichum graminicola (strain M1.001 / M2 / FGSC 10212) (Maize anthracnose fungus) (Glomerella graminicola) Imported Automatic assertion inferred from database entries i Proteomes:UP000008782 The ITS and ACT sequences are identical with those of C. brevisporum … Kingdom Fungi ( 1FUNGK ) Phylum Ascomycota ( 1ASCOP ) Subphylum Pezizomycotina ( 1PEZIQ ) Class Sordariomycetes ( 1SORDC ) Subclass ... Colletotrichum graminicola (COLLGR) Colletotrichum grevilleae (COLLGV) Colletotrichum grossum (COLLGS) Corn also requires ample space as it grows large in size and is pollinated by wind. 2009, Sarethy et al. Image 1570307 is of anthracnose (Colletotrichum graminicola ) asexual spore. 2020: baaa062. The taxonomy and nomenclature of Colletotrichum species are confusing, even to scientists working in this field . Colletotrichum graminicola, the causal agent of sorghum anthracnose, is known as a variable pathogen. It is by Gerald Holmes at Strawberry Center, Cal Poly San Luis Obispo. [Full text] [PubMed], Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma), Colletotrichum graminicola species complex, Go to NCBI genomic BLAST page for Colletotrichum graminicola, Systematic Mycology and Microbiology Laboratory, Fungal Databases, WebScipio - eukaryotic gene identification, diArk - a resource for eukaryotic genome research. Colletotrichum gloeosporioides (Anthracnose) is one of the most common Colletotrichum fungal plant pathogens. Taxonomy. Colletotrichum cereale, a grass-inhabiting taxon which occupies a separate clade from the graminicola aggregate, does not appear to show genus-level specificity, though all strains to date derive from the same family (Crouch et al. Many of the species in this genus are plant pathogens, but some species may have a mutualistic relationship with hosts. 2014). & … December 1991 Some of the important host plants include citrus, yam, papaya, avocado, coffee, eggplant, sweet pepper, and tomato. Corn plants are very heavy feeders and even the most fertile of soils may need to supplemented with nutrients as the plants develop, particularly nitrogen. Among coelomycetes, Colletotrichum is the single genus that has garnered most attention, probably because of the diversity, distribution, and devastation represented particularly by C. acutatum, C. gloeosporioides, C. graminicola, and C. falcatum (Thaung 1970). It produces substantial amount of pre- and post-harvest loss in these crops worldwide. In contrast, CHS-1 was ranked as the worst marker for the C. graminicola species complex. relevant scientific literature for the most reliable information. Reference: How to cite this resource - Schoch CL, et al. Taxonomy - Colletotrichum falcatum (SPECIES) ))) Map to UniProtKB (85) Unreviewed (85) ... › Colletotrichum graminicola species complex. Hooker AL, 1976. Because of the difficulties in recognizing them in vitro, we have designed a quick and unambiguous molecular test, based on the amplification of a specific fragment of the internal transcribed spacer 1 region, to distinguish any Colletotrichum isolate from other fungi, including the common pathogenic species. In: Proceedings Corn Sorghum Research Conference, American Seed Trade Association 31, Washington DC, USA, 167-182. Subject browse uses CABICODES which are CABI’s own classification codes for broad subjects that would be difficult to describe with keywords alone. Colletotrichum taxonomy consider incorporatin g certain measures to illustrate a new species as followed in bacterial taxonomy (Lapage et al. The molecular taxonomy of isolates of Colletotrichum gloeosporioides and previously we found that C. gloeosporioides isolated from northern jointvetch was largely a clonal population, although a repetitive sequence could differentiate strains within populations. Plant Disease Reporter, 54:60-62. Colletotrichum caudatum sensu lato is a morphologically distinctive fungal pathogen of warm-season grasses (C4 photosynthesis, or C4) in Poaceae tribe Andropogoneae (Nag Raj 1973, Sutton 1980, 1992, Hyde et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). In the genus Colletotrichum localized hemibiotrophy, ... graminicola (AF289227, DQ195707, DQ195708) ... taken together, the preliminary evidence from molecular taxonomy, as well as measurements of morphological and growth attributes presented in the current study, groups these isolates as specialized forms of C. destructivum. Incidence of Colletotrichum graminicola on Sorghum bicolor introductions. Basic requirements Corn is best grown in warm, tropical and sub-tropical regions as it requires warm soils to develop optimally. Colletotrichum graminicola Taxonomy ID: 31870 (for references in articles please use NCBI:txid31870) current name Isolates of C. graminicola were collected for study of genetic diversity of this fungus. Each database record is assig [Full text] [PubMed], Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma), Colletotrichum graminicola species complex. HIS3 differs in one, GAPDH and TUB2 each in four nucleotides from C. brevisporum. Colletotrichum graminicola NRRL 13649 Colletotrichum graminicola NRRL 47511 Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information. 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